UW-Madison LOCI
- 39 followers
- Madison, WI, USA
- https://loci.wisc.edu
- @UWMadisonLOCI
Pinned Loading
Repositories
- qupath-extension-cell-analysis-tools Public
Python-powered clustering and phenotyping for highly multiplexed imaging data in QuPath
- flamingo-stitcher Public
Standalone light-sheet tile stitching (CLI + GUI) for Flamingo T-SPIM data, extracted from py2flamingo.
- WideFieldAssembly Public
An interactive Unreal Engine project designed to present and teach the structure of a wide-field microscope system.
- qupath-extension-tiles-to-pyramid Public
An extension to allow the creation of a pyramidal image file from individual tiles, based on known tile positions.
- qupath-extension-qpsc Public
Java based extension for QuPath allowing control of a microscope through MicroManager
- interactive-microscopy-courseware Public
Interactive, self-contained HTML teaching pages for microscopy (UW-LOCI).
- microscope_command_server Public
Socket-based command server for remote microscope control and QuPath integration
- qupath-extension-fiber-analysis Public
QuPath extension for fiber straightness, TWOMBLI-derived morphometrics, and GLCM texture analysis on segmented collagen fibers (Java + Appose Python).
Top languages
Loading…
Most used topics
Loading…