Contains code to conduct analyses presented in the IGES 2025 Educational Workshop: Practical Tutorial – A Walkthrough of Cross-Biobank Analysis.

A collection of visual guides to help applied scientists learn causal inference.

Efficiently calculate ancestry-adjusted sparse GRM

Seed repository for homeworks in cs181, s16

My own notes, implementations, and musings for MIT's graduate course in machine learning, 6.867

[GitHub-only] R package that downloads and setups a compiled code environment for macOS

A Repository for Single- and Multi-modal Speaker Verification, Speaker Recognition and Speaker Diarization

Reinforcement Learning Short Course

R implementation of Correlated Meta-Analysis (CMA) by the Province Lab is available on CRAN

VCF Merger for UK Biobank RAP

VCF Trimmer (UK Biobank RAP)

Description of VCF to aGDS conversion and annotation on the UK Biobank RAP

Course projects and notes from the Stanford Coursera Machine Learning MOOC

Stanford CVX 101 MOOC course Files

Assessment of Heterogeneous Treatment Effect Estimation Accuracy via Matching

LinCDE: Conditional Density Estimation via Lindsey's Method

A fast CSV command line toolkit written in Rust.

Home work in python using cvxpy to Stephen Boyd's Convex Optimization class (CVX101 Stanford)

Cell type specific enhancer-gene predictions using ABC model (Fulco, Nasser et al, Nature Genetics 2019)

for Data Science class on Coursera

Acceptance rates for the major AI conferences

A flexible tool for meta-analysis

Karl Broman's website

Minimal tutorial on making a simple website with GitHub Pages

A collection of work related to COVID-19

Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.

R package to reconstruct individual-level data from KM plots published in academic journals

Convergent Policy Optimization for Safe Reinforcement Learning