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《深入理解 AI Agent：设计原理与工程实践》（李博杰 著）开源主仓库：全书正文、编译版 PDF 与按章配套代码
Waku Waku! Waku agent is your personal AI agent, on your own laptop, in code you can read in an afternoon — harness + loop + memory + eval
HTML PPT Studio — AgentSkill with 24 themes, 31 layouts, 20+ animations for building professional HTML presentations
Official release of OneGenome-Rice models.
Assign issues to Claude Code, Codex, Cursor, and 17 more coding agents like teammates — open-source and self-hostable.
A curated list of autonomous improvement loops, research agents, and autoresearch-style systems inspired by Karpathy's autoresearch.
Foundation Models for Genomics & Transcriptomics
LabClaw – Operating Layer for LabOS (Stanford-Princeton AI Co-Scientists)
The agent harness performance optimization system. Skills, instincts, memory, security, and research-first development for Claude Code, Codex, Opencode, Cursor and beyond.
Genome modeling and design across all domains of life
A Flexible Framework for Experiencing Heterogeneous LLM Inference/Fine-tune Optimizations
yangjl / methylome_evolution
Forked from jyanglab/msfs_teomSFS using a teosinte natural population
Rescale genetic polymorphism data to match a common sample size.
Cutadapt removes adapter sequences from sequencing reads
JupyterLab computational environment.
Dockerised Next Generation Sequencing Pipeline (QC, Align, Calling, Annotation)
Specifications of SAM/BAM and related high-throughput sequencing file formats
Using ANGSD and Python/R to calculate and plot pi-between in windows along the genome
R's data.table package extends data.frame:
Programs to analyse NGS data for population genetics purposes
An interactive data visualization tool which brings matplotlib graphics to the browser using D3.
Pysam is a Python package for reading, manipulating, and writing genomics data such as SAM/BAM/CRAM and VCF/BCF files. It's a lightweight wrapper of the HTSlib API, the same one that powers samtool…