Stars
Tiled processing of arbitrarily large images — any image, any function.
Read, write, search, and surgically edit Obsidian vault notes, tags, and frontmatter via MCP. STDIO or Streamable HTTP.
TRAjectory-based Differential Expression analysis for SEQuencing data
Zotero MCP: Connects your Zotero research library with Claude and other AI assistants via the Model Context Protocol to discuss papers, get summaries, analyze citations, and more.
Taste-Skill - gives your AI good taste. stops the AI from generating boring, generic slop
Privacy first, AI meeting assistant with 4x faster Parakeet/Whisper live transcription, speaker diarization, and Ollama summarization built on Rust. 100% local processing. no cloud required. Meetil…
Bartosz Milewski's 'Category Theory for Programmers' unofficial markdown source
HyperFormula is an open-source headless spreadsheet for business web apps. It comes with over 400 formulas, CRUD operations, undo-redo, clipboard support, and sorting.
StackStorm (aka "IFTTT for Ops") is event-driven automation for auto-remediation, incident responses, troubleshooting, deployments, and more for DevOps and SREs. Includes rules engine, workflow, 16…
Bichon – A lightweight, high-performance Rust email archiver with WebUI
Kilo is the all-in-one agentic engineering platform. Build, ship, and iterate faster with the most popular open source coding agent.
High-performance code intelligence MCP server. Indexes codebases into a persistent knowledge graph — average repo in milliseconds. 158 languages, sub-ms queries, 99% fewer tokens. Single static bin…
A fast, programmable molecular viewer for research, scripting, and the web
An easy-to-use, flexible website template for labs. https://doi.org/10.5281/zenodo.17228741
A faithful and open-source remake of Cave Story's engine written in Rust
Making Fabio Crameri's perceptually uniform colourmaps for geosciences available on PyPI and conda-forge
Deep-learning based semantic and instance segmentation for 3D Electron Microscopy and other bioimage analysis problems based on pytorch.
A BioIO reader plugin for reading bioformats formatted images.
A Learning-to-Optimize (L2O) package for Mixed-Integer Nonlinear Programming (MINLP)
An agentic skills framework & software development methodology that works.
The open agent skills tool - npx skills
A recast of cell segmentation models built on the Burn deep learning framework.
Image-processing software for cryo-electron microscopy
Intuitive, easy CLIs based on python type hints.
Modern Bio-Formats wrapper with clean lazy Python API
tlambert03 / bffile
Forked from imaging-formats/bffileYet another Bio-Formats wrapper for Python