#
Lists (1)
Starred repositories
29
stars
written in HTML
Clear filter
Workshops presented by the Gladstone Bioinformatics Core
Tool Shed repositories maintained by the Intergalactic Utilities Commission
ClinVar aggregates information about genomic variation and its relationship to human health. Contact us at 'clinvar@ncbi.nlm.nih.gov' with any questions or comments.
Detecting contamination in NGS data and multi-species analysis
Materials on the analysis of microarray expression data; focus on re-analysis of public data ( http://tinyurl.com/cruk-microarray)
VCF-Miner: A graphical user interface for sorting, filtering and querying annotated VCF Files
The GenePattern Server web application
Data, scripts, and lectures for the Introduction to Metagenomics Summer Workshop 2019.
FROGS is a galaxy/CLI workflow designed to produce an OTUs count matrix from high depth sequencing amplicon data.
This repository contains all CWL descriptions of the MGnify pipeline version 5.0.
R package to calculate the Aneuploidy Score from Chromosome Arm-level SCNAs/Aneuploidies (CAAs) as outlined and expanded by Shukla et al. (https://doi.org/10.1038/s41467-020-14286-0)
Seave is a web platform that enables genetic variants to be easily filtered and annotated with in silico pathogenicity prediction scores and annotations from popular disease databases. Seave stores…
Open-source opinionated Galaxy-based framework for microbiota analysis
iMAP v1.0 (Pre-release): Integrated Microbiome Analysis Pipeline
A pipeline for analysis of exome seq from raw fastq to annotated variants
mulinlab bioinformatics pipelines for reproducible, efficient and convenient bioinformatics research.
Provides HTML reports with detailed coverage analysis for clinical NGS data.
Aggregating and analysing gene panel data in R from Genomics England
Development of phencards.org web server for one stop shop of phenotype information
single sample whole exome sequencing alignment/annotation pipeline
hosting the html reports for the SeqNextGen project