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Commits on Jul 29, 2026

• Fix Rd \link{} targets with missing package anchors

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Commits on Jun 8, 2026

• Adaptations for BioC 3.24; version number bumped to 1.45.1

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Commits on Aug 23, 2024

• Change of msaPrettyPrint() interface to allow for workaround around texi2dvi() problems; version number bumped to 1.37.4

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Commits on Apr 26, 2024

• Update of help pages; version number bumped to 1.35.5

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Commits on Apr 25, 2024

• fix link to BLOSUM62

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• one more tweak

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• Fix of help page for msaConservationScore() to account for move of matrices to the 'pwalign' package

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Commits on Apr 23, 2024

• Change of maintainer e-mail address and website; change of format of vignette; version number bumped to 1.35.2

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Commits on Feb 17, 2022

• various fixes; version number bumped to 1.27.1

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Commits on Aug 12, 2020

• addressed UPGMA error in msaClustalW() on Windows using R 4.0.x

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Commits on Mar 31, 2017

• New functionality for computing consensus sequences and conservation scores; version number bumped to 1.7.1

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  Ulrich Bodenhofer

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Commits on Jun 23, 2016

• conversions extended + corresponding changes in documentation; version number bumped to 1.5.3

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  Ulrich Bodenhofer

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Commits on May 2, 2016

• Last-minute fix of msaPrettyPrint(); version number bumped to 1.3.7

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  Ulrich Bodenhofer

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Commits on Apr 6, 2016

• Added a new function msaCheckNames; version number bumped to 1.3.4

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  Ulrich Bodenhofer

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Commits on Feb 25, 2016

• Minor corrections in one man page

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  Ulrich Bodenhofer

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• added new conversion tools; version number bumped to 1.3.3

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  Ulrich Bodenhofer

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Commits on Dec 21, 2015

• further fixes

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  Ulrich Bodenhofer

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Commits on Oct 13, 2015

• Last-minute fixes; version number bumped to 1.1.3

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  Ulrich Bodenhofer

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Commits on Oct 10, 2015

• Multiple new features and fixes; version number bumped to 1.1.2

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  Ulrich Bodenhofer

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Commits on Apr 15, 2015

• Multiple fixes; final comit before release; version number bumped to 0.99.6

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  Ulrich Bodenhofer

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Commits on Apr 10, 2015

• Various fixes and improvements; version number bumped to 0.99.3

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  Ulrich Bodenhofer

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• add package to the repository

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  sonali-bioc

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