tmux source code

A simple and easy-to-use library to enjoy videogames programming

AddressSanitizer, ThreadSanitizer, MemorySanitizer

A standalone and lightweight C library

Implementations of SIMD instruction sets for systems which don't natively support them.

A versatile pairwise aligner for genomic and spliced nucleotide sequences

MMseqs2: ultra fast and sensitive search and clustering suite

Sequence-to-graph mapper and graph generator

zsv+lib: tabular data swiss-army knife CLI + world's fastest (simd) CSV parser

Fast taxonomic classification of metagenomic sequencing reads using a protein reference database

A programming language benchmark

The libsais library provides fast linear-time construction of suffix array (SA), generalized suffix array (GSA), longest common prefix (LCP) array, permuted LCP (PLCP) array, Burrows-Wheeler transf…

Pairwise whole genome aligner

WFA-lib: Wavefront alignment algorithm library v2

Constructing a pangenome gene graph

Yet another k-mer analyzer

A simple toolset for BED files (warning: CLI may change before bedtk becomes stable)

abPOA: an SIMD-based C library for fast partial order alignment using adaptive band

BWT construction and search

Simple pileup-based variant caller

Identify long STRs, VNTRs, satellite DNA and other low-complexity regions in a genome

Scoring GT/AG sites for improving spliced alignment

A reimplementation of the WaveFront Alignment algorithm at low memory

Symmetric DUST for finding low-complexity regions in DNA sequences

Generic hash table library in C

Instantaneous Metagenome Taxonomic Profiling with MetaKSSD

Constructing the genernalized suffix array of a string set

Testing rank calculation on BWT (not for endusers)