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16 stars written in R
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Friends don't let friends make certain types of data visualization - What are they and why are they bad.

R 7,034 285 Updated Sep 3, 2025

Statistical Rethinking Course for Jan-Mar 2023

R 2,376 267 Updated Nov 28, 2023

🌈 Interactive analysis of metagenomics data

R 447 80 Updated Sep 17, 2025

Collection of Tumor-Infiltrating Lymphocyte Single-Cell Experiments with TCR

R 106 7 Updated Dec 18, 2025
R 91 16 Updated Sep 3, 2024

Using TCR and expression for sequence embedding

R 63 6 Updated Jan 6, 2026

Spatial Cellular Estimator for Tumors

R 62 6 Updated Mar 23, 2026

causal TWAS (cTWAS)

R 47 14 Updated Mar 18, 2026
R 38 8 Updated Nov 27, 2023

Mapping the Functional Landscape of TCR Repertoire

R 36 8 Updated Oct 8, 2021

Whole mouse brain snATAC seq analysis

R 29 9 Updated Apr 18, 2025

Accurate metagenomi/metatranscriptomic analysis pipeline

R 23 4 Updated Jun 28, 2021

Visualize clonal expansion via circle-packing. 'APackOfTheClones' extends 'scRepertoire' to produce a publication-ready visualization of clonal expansion at a single cell resolution, by representin…

R 21 2 Updated Aug 28, 2025

pangenome alignment, implicit/explicit graph, and variants for human pangenome project release 2

R 18 1 Updated Jan 29, 2026

RGenEDA package for exploratory data analysis

R 13 3 Updated Feb 13, 2026

Pseudotimecacade visualizes gene expression cascade in pseudotime analysis

R 7 1 Updated Feb 16, 2026