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Starred repositories

26 stars written in C
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The fastest path to AI-powered full stack observability, even for lean teams.

C 78,275 6,395 Updated Mar 31, 2026

A new bootable USB solution.

C 75,405 4,722 Updated Feb 1, 2026

Lean's LEDE source

C 31,401 19,456 Updated Mar 29, 2026

Driver and tools for controlling Lenovo Legion laptops in Linux including fan control and power mode.

C 2,905 101 Updated Dec 19, 2025

RNA-seq aligner

C 2,169 547 Updated Mar 18, 2025

A versatile pairwise aligner for genomic and spliced nucleotide sequences

C 2,148 457 Updated Feb 13, 2026

SRA Tools

C 1,321 279 Updated Mar 31, 2026

An Openwrt firmware for home use scenarios.

C 1,084 182 Updated Aug 3, 2024

De novo assembler for single molecule sequencing reads using repeat graphs

C 912 178 Updated May 2, 2025

BWK awk modified for biological data

C 639 117 Updated Aug 11, 2022

Redbean: A fuzzy Bruijn graph approach to long noisy reads assembly

C 531 93 Updated Sep 27, 2023

GenomeTools genome analysis system.

C 335 64 Updated Nov 10, 2025

Inference of ploidy and heterozygosity structure using whole genome sequencing data

C 292 28 Updated Feb 25, 2026

haplotypic duplication identification tool

C 279 24 Updated Oct 30, 2025

Next generation sequencing reads de novo assembler.

C 239 79 Updated Sep 20, 2025

sensitive and precise assembly of short sequencing reads

C 163 15 Updated Oct 11, 2024

Match up paired end fastq files quickly and efficiently.

C 156 33 Updated Jun 2, 2024

Tool for stripping adaptors and/or merging paired reads with overlap into single reads.

C 146 51 Updated Oct 4, 2016

An efficient FASTQ manipulation suite

C 139 19 Updated Jan 27, 2020

LoFreq Star: Sensitive variant calling from sequencing data

C 111 35 Updated Oct 16, 2025
C 65 21 Updated Dec 9, 2020

Machine-learning-based general bacterial promoter prediction tool.

C 53 12 Updated Jun 19, 2023

Likelihood-based Selective Sweep Detection

C 42 6 Updated Oct 12, 2023

Pipeline for scaffolding and breaking a genome assembly using 10x genomics linked-reads

C 21 2 Updated Aug 2, 2022

DNA methylation and variant Caller for Bisulfite Sequencing Data.

C 5 3 Updated Nov 3, 2020

Hybrid Error Correction Tool for NGS Long Reads

C 5 1 Updated Apr 26, 2017