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onsv

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Commits on Sep 22, 2014

• added support for structural variants in VCF format. Integration with speedseq.

  

  arq5x

  committed
  94f3a1a

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Commits on Mar 3, 2014

• speedup loading for unit tests via --test-mode. Also provide --skip-gene-tables

  

  arq5x

  committed
  ae80ce9

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Commits on Feb 13, 2014

• Ensure mapping quality is a single value. Supports platypus VCF output

  chapmanb

  committed
  7279967

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Commits on Mar 24, 2013

• pep8

  

  arq5x

  committed
  3b6004f

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Commits on Jan 28, 2013

• bugfix: return values

  

  Uma Paila

  committed
  8db225b

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Commits on Dec 21, 2012

• handle single values in infotag.py

  

  arq5x

  committed
  beef21b

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Commits on Sep 19, 2012

• Generalize cleaning of INFO attributes, handling tuples where single values are expected

  chapmanb

  committed
  2214722

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Commits on Aug 30, 2012

• added new core VCF4.1 attributes

  

  arq5x

  committed
  b650159

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Commits on Jul 6, 2012

• Handle allele number results with multiple values

  chapmanb

  committed
  bf93547

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Commits on Jul 5, 2012

• Handle allele balance import with returned list by pulling first item, ala get_allele_count

  chapmanb

  committed
  d399e27

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Commits on Apr 5, 2012

• ENH: performance - only create DbSnp namedtuple once.

  arq5x

  committed
  aaee43e

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Commits on Mar 27, 2012

• changed software name from pop to gemini

  arq5x

  committed
  a54ea6d

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