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Commits on Sep 22, 2014

• update tests

  

  arq5x

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Commits on Aug 26, 2014

• edit for latest clinvar

  

  udp3f

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• added unit test for cosmic

  

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Commits on Aug 14, 2014

• [BUG] fix for multiple wildcards on same column. Many thanks to Tommaso Pippucci at the UWCMG course\!

  

  arq5x

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Commits on Aug 6, 2014

• Fix the unit test for --format tped.

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  roryk

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• Fix for not finding the installed extra annotations.

  roryk

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Commits on Aug 5, 2014

• missing include

  

  arq5x

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Commits on Jul 17, 2014

• fix ROH tests

  

  arq5x

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Commits on Jul 16, 2014

• [TST] add tests for ROH tool.

  

  arq5x

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• speed up unit testing.

  

  arq5x

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Commits on Jun 20, 2014

• more wildcard tests, mo better docs, and mo better whitespace tolerance

  

  arq5x

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Commits on Jun 16, 2014

• Merge branch 'genotype_wildcard_operators'

  

  arq5x

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• added new unit tests for all, any, none, count logic

  

  arq5x

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Commits on Jun 6, 2014

• avoid warning

  

  udp3f

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• fix warning

  

  udp3f

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Commits on Jun 5, 2014

• fix unit tests

  

  udp3f

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Commits on Jun 2, 2014

• fix for latest updates

  

  udp3f

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Commits on May 28, 2014

• [ENH] genotype wildcards in SELECT

  

  arq5x

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Commits on May 19, 2014

• fit in changes with load

  

  udp3f

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Commits on May 7, 2014

• suppress stdout msgs

  

  udp3f

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• suppress stdout msgs

  

  udp3f

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• test modes for cadd

  

  udp3f

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• suppress stdout(CADD/GERP msg at load) for unit tests

  

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Commits on Apr 29, 2014

• add impact_so for testing

  

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Commits on Apr 26, 2014

• add unit test: mouse phenotype data

  

  udp3f

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Commits on Apr 12, 2014

• update vcf for clinvar unit testing

  

  udp3f

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• update unit tests to include error strings

  

  udp3f

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Commits on Apr 6, 2014

• add unit test for CADD

  

  udp3f

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• add vcf for cadd unit test

  

  udp3f

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• load vcf for cadd unit test

  

  udp3f

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Commits on Mar 25, 2014

• update clinvar unit test for version changes

  

  udp3f

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Commits on Mar 24, 2014

• update VCF with VEP annotations

  

  udp3f

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• update biotype column

  

  udp3f

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• update biotype column

  

  udp3f

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• add unit tests for VEP severe_impacts, impacts

  

  udp3f

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