Code and documentation for setting up and managing a tilde.club server

Plugins for the Ensembl Variant Effect Predictor (VEP)

Language agnostic RESTful data access to Ensembl data over HTTP

💾 📃 "Reads to report" for public health and clinical microbiology

GFF3sort: A Perl Script to sort gff3 files and produce suitable results for tabix tools

Tools for making blobplots or Taxon-Annotated-GC-Coverage plots (TAGC plots) to visualise the contents of genome assembly data sets as a QC step (NO LONGER MANTAINED)

A unified array job submitter for LSF, SGE/UGE and Slurm

A toolkit for annotation of transposable element families from unassembled sequence reads

Escape Excel: a tool for preventing gene symbol and accession conversion errors

1000 genomes and Merriman Lab Galaxy

DNANexus Whole Genome Bisulphite Analysis Pipeline

Snakefiles/Python scripts to create conservation tracks

AMETHST, or Analysis METHod Selection Tool, is an automated pipeline that makes it possible to objectively assess the relative performance of multiple analysis methods applied to annotation abundan…