De novo annotation of young retrotransposons

Evolutionary Transcriptomics with R

Repository of the R-packageGen3sis

MCMCtree tutorials

A Framework for Coalescent Simulation in R

cancereffectsizeR: Estimate somatic mutation rates and quantify selection in cancer

R package containing datelife's core functionality

R package to perform sensitivity analysis for comparative methods

signatselect: Identifying signatures of selection

An `R` package for various phylogenetic and evolutionary biology data manipulations

🌳👨 An R package for manipulating phylogentic trees

coevolve R package for Bayesian generalized dynamic phylogenetic models using Stan

Calculating temperature and precipitation predictability at the global scale

paleobuddy: an R package for simulating diversification dynamics, fossil records and phylogenies in R.

Computational models for phonetic change

R/Rcpp implementation of the ScisTree algorithm

Code for "Conditional prediction of consecutive tumor evolution using cancer progression models: What genotype comes next?", J.Diaz-Colunga, R.Diaz-Uriarte: https://doi.org/10.1371/journal.pcbi.1009055

Analyses of coelacanth morphometrics, disparity, phylogeny, and rate of evolution

An R package for flow cytometry histogram analysis

Adapted chi-squared and CMH test to evolve and resequenced data. Includes drift and pool sequencing variance in the tests