Evolution of Airbnb rentals 🏠🛏️

SEEPS: Sequence Evolution and Epidemiological Process Simulator

This repository includes all the analyses related to the influence of environment in the early stages of evolution in the synthetic polyploid species Arabidopsis kamchatica

Individual-based model for the evolution of polyandry and inbreeding

Data, code & figures used to assess global patterns of potential thermal niche filling

Data, source code and scripts for BIORXIV/2019/643585v3

Methods and data to reproduce the investigation on the adaptive trait found in the genes of the methane oxidation metabolic module of type Ia methanotrophs

Script and data supporting a Brassica network analysis manuscript submitted to Applications in Plant Sciences

Estonian Research Council (PRG 741): Phylogenetic comparative analyses of body size evolution in geometrid moths

Differential expression analysis of CAMA-1 cells in the context of ribociclib resistance and facilitation.

A pipeline to estimate the rate of purifying selection acting on stop codons of ortholog clusters from OrthoDB.(Based on https://github.com/cseoighe/StopEvol)

How does disturbance on a landscape affect the establishment of new polyploid plant species?

An R package for flow cytometry histogram analysis

FlowNet.R contains classes with different methods for constructing, evolving and analyzing random connected directed "flowing networks", with "core nodes" that are directly or indirectly connected to an input and output nodes. Experiments is a folder containing examples of ensambles of networks evolutions respect to different operators that want…

Scripts to analyze multiplex adaptome sequencing data

A shiny application that identifies the phenotype driving genes in evolved E. coli using Evolutionary Action.

Computational models for phonetic change

Scripts, analysis code, input data, and intermediate files for response to Soni et al.

This repository contains a script for analyzing SARS-CoV-2 evolution in epitopes during the first two waves of the COVID-19 pandemic. The immunological data come from a high protein density array analysis of SARS-CoV-2 epitopes in 15 patients (N'Guessan A. et al., 2022). This script and the related data can be updated manually to integrate data …

A presentation for the evolution series at Tel-Aviv University Botanical Gardens, 16.5.2013