dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC
Neuroimaging analysis and visualization suite
MIRTK based SVR reconstruction
MRI simulation toolkit
The Medical Image Analysis Laboratory Super-Resolution ToolKit (MIALSRTK) consists of a set of C++ and Python processing and workflow tools necessary to perform motion-robust super-resolution fetal MRI reconstruction in the BIDS Apps framework.
EEG & MRI processing, Micro-States analysis & Sources localization
HDR-MRI Algorithms from "Local contrast-enhanced MR images via high dynamic range processing" published in MRM
SpinWalk, a framework for Monte-Carlo simulation to model spins random walk within a network. SpinWalk paper:
Compresso: Efficient Compression of Segmentation Data For Connectomics
A RGB Image Composer Plugin For Osirix
A library to calculate parametric maps in MRI. For details see https://doi.org/10.1016/j.softx.2019.100369
A header-only, no-dependency, C++11 library for accessing FreeSurfer neuroimaging file formats.
QSM pipeline for Multi Parameter Mapping (MPM) acquisitions
utilities for dealing with bruker nmr/mri systems and data
Python version of pulseq-cest
Quick and easy NIfTI/BV viewer
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