Quantitative MRI Made Easy with qMRLab: MRI software for data Simulation, analysis and visualization

Compressed Sensing and Motion Correction LAB: An MR acquisition and reconstruction system

Matlab GUI pipeline application for quantitative susceptibility mapping (QSM)

MATLAB / Octave tools for BIDS datasets

MATLAB code for Multidimensional Diffusion MRI

Hands-on examples for motion estimation and correction in MRI

🔀 Medical software for Processing multi-Parametric images Pipelines

Please use the new version of LiFE: www.github.com/brain-life/encode

MATLAB toolbox for visualizing brain data on surfaces.

iterative Motion Compensation (iMoCo) reconstruction for MRI. Includes both Matlab and Python implementations. reference doi 10.1002/mrm.27998

Image Segmentation using Fuzzy C-Means Clustering with Bias Field Correction

EPTI (Echo Planar Time-resolved Imaging) raw-data processing, image reconstruction and data preprocessing.

A generalized GRAPPA algorithm that works for arbitrary (non-Cartesian) readout trajectories

Repository for ISMRM Reproducible Research Study Group Challenge 2019

General phase regularized MRI reconstruction using phase cycling

👐 This package includes 3 MR fingerprinting methods to reconstruct parametric maps: standard dictionary-based matching and dictionary-based learning using a statistical or a neural network approach.

MRI RF pulse simulation in MATLAB

A Matlab toolbox for examining the quality of structural (SNR) and functional (tSNR, SFNR) MRI

MRI preprocessing pipeline