satijalab / seurat
R toolkit for single cell genomics
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R toolkit for single cell genomics
R's data.table package extends data.frame:
📊 A universal enrichment tool for interpreting omics data
Inferring CNV from Single-Cell RNA-Seq
A curated list of awesome R packages, frameworks and software.
An implementation of the Grammar of Graphics in R
dplyr: A grammar of data manipulation
Tree-sitter grammar for R
Produce PRISMA-2020 compliant flow diagrams
Accurate sample inference from amplicon data with single nucleotide resolution
Simple Features for R
renv: Project environments for R.
phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others. See the phyloseq front page:
R package for detecting doublets in single-cell RNA sequencing data
Fast, sensitive and accurate integration of single-cell data with Harmony