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Repository to host tool-specific module files for the Nextflow DSL2 community!
Pipeline to fetch metadata and raw FastQ files from public databases
Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data
hybrid assembly and differential binning workflow for metagenomics, transcriptomics and pathway analysis
Assembly and annotation of metatranscriptomic or metagenomic data for prokaryotic, eukaryotic and viruses.
A pipeline to simulate sequencing reads, such as Amplicon, Target Capture, Metagenome, and Whole genome data.