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Starred repositories

7 stars written in Java
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spotbugs / spotbugs

SpotBugs is FindBugs' successor. A tool for static analysis to look for bugs in Java code.

Java 3,862 652 Updated Apr 18, 2026

broadinstitute / gatk

Official code repository for GATK versions 4 and up

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loiane / curso-java-basico

☕ [PT-BR] Código fonte apresentado no curso de Java gratuito do blog loiane.com [EN] Source code of my free Java training.

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broadinstitute / picard

A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.

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s-andrews / FastQC

A quality control analysis tool for high throughput sequencing data

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androidmads / SQLite2XL

Library to Convert SQLite to Excel and Vice-Versa

Java 169 59 Updated Apr 21, 2020

seidels / tidetree

A Bayesian phylogenetic framework to estimate single-cell trees and population dynamic parameters from genetic lineage tracing data

Java 6 1 Updated Apr 6, 2026

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