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Fudan University
- Shanghai
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14:02
(UTC +08:00) - mengzijun@fudan.edu.cn
- https://orcid.org/0000-0001-5959-4737
- https://scholar.google.com/citations?user=jWOBv50AAAAJ&hl=en
- https://pypi.org/user/Mencius/
- https://hub.docker.com/u/jmencius
Highlights
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bioconda-recipes Public
Forked from bioconda/bioconda-recipesConda recipes for the bioconda channel.
Shell MIT License UpdatedSep 17, 2026 -
BamQVFilter Public
Filter BAM file based on read mean QV, implemented in Rust
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MethQC Public
Quality control for DNA methylation detection in long-read sequencing
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SpliSync Public
Forked from splicebox/SpliSyncGenomic language model-driven correction of splice sites in long RNA read alignments
C GNU General Public License v3.0 UpdatedJul 13, 2026 -
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fakephase Public
Fake telomere-to-telomere haloptype phasing algorithm
Python MIT License UpdatedApr 28, 2026 -
pan Public
Process haplotype intermediate results for pie (https://github.com/JMencius/pie)
Python MIT License UpdatedApr 28, 2026 -
LongBow Public
Basecalling configuration prediction from FASTQ files
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LongBowDB Public
A database hosting predicted basecaller configurations of nanopore sequencing data in the SRA database
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seqguard Public
FASTQ quality control
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Arrow Public
LongBow manuscript code repository
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assembly_accuracy Public
Forked from jts/assembly_accuracyA simple tool for assessing the accuracy of genome assemblies
Python MIT License UpdatedApr 16, 2024 -
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