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20 results for source starred repositories written in C++
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Sampler, Sequencer, Multi-engine synth and effects - in a box! [WIP]

C++ 2,676 148 Updated Jan 23, 2023

An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)

C++ 2,212 355 Updated Oct 14, 2025

The open source framework for sample based instruments

C++ 1,285 146 Updated Nov 5, 2025

Versatile open-source tool for microbiome analysis

C++ 722 129 Updated Oct 24, 2025

a Bioinformatics Application for Navigating De novo Assembly Graphs Easily

C++ 652 108 Updated Dec 3, 2022

Arduino-based MIDI to CV converter

C++ 432 70 Updated Jun 30, 2018

Application for making ENCODE Blacklists

C++ 327 41 Updated Apr 23, 2021

Tunefish virtual analog synthesizer

C++ 290 35 Updated Sep 12, 2023

A fast whole-genome aligner based on de Bruijn graphs

C++ 153 19 Updated Jul 6, 2025

Pan-genome inference and genotyping with long noisy or short accurate reads

C++ 118 15 Updated Dec 13, 2024

Teensy based audio looper

C++ 77 9 Updated Jul 17, 2019

Genome comparison via de Bruijn graph. To get the latest stable version, please visit our site.

C++ 70 17 Updated Oct 29, 2020

RabbitTClust: enabling fast clustering analysis of millions bacteria genomes with MinHash sketches

C++ 51 5 Updated Sep 22, 2025
C++ 44 3 Updated Nov 20, 2021

Output FASTQ summary statistics in JSON format

C++ 29 2 Updated Oct 30, 2022

A tool to root phylogenies

C++ 22 9 Updated Sep 5, 2024

Strain Prediction and Analysis with Representative SEquence

C++ 19 4 Updated Dec 8, 2024

Uses cDBG to count unitigs in bacterial populations

C++ 16 2 Updated Feb 15, 2023

C++ tools for NCBI taxonomy tasks

C++ 11 3 Updated Jun 26, 2025
C++ 2 Updated May 6, 2024