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Analysis of RNAseq data from (host-associated) microbial mixtures
Assessing the quality of prokaryotic genomes, filtering and dereplication
Automated virus amplicon sequencing analysis program integrated with Nextflow pipeline manager.
QC and assemble reads from different sequencing technologies into a genome obtained from a single organism
De novo assembly with UniCycler, within a Nextflow workflow
Nextflow workflow running the HUMAnN metagenomic analysis tool
Annotation of Microbial Genomes by Microbiome Association
A simple MAG assembly pipeline based on NF-Core modules