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written in Groovy
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A DSL for data-driven computational pipelines
Genome annotation editor with a Java Server backend and a Javascript client that runs in a web browser as a JBrowse plugin.
A scalable bacterial genome assembly, annotation and analysis pipeline
nextflow-io / nf-validation
Forked from nextflow-io/nf-schemaParams validation plugin for Nextflow pipelines
MEGARes and AmrPlusPlus - A comprehensive database of antimicrobial resistance genes and user-friendly pipeline for analysis of high-throughput sequencing data
BACTpipe: An assembly and annotation pipeline for bacterial genomics