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Rust 3 Updated Mar 12, 2026

yes

Rust 5 Updated Mar 19, 2026

Norovirus metagenomics Nextflow pipeline

Jupyter Notebook 4 1 Updated Jul 9, 2024
Java 25 6 Updated Dec 2, 2022

Depth-weighted De-Mixing

HTML 129 37 Updated Mar 27, 2026

The D4 Quantitative Data Format

Rust 171 20 Updated Nov 28, 2025
HTML 2 Updated Mar 19, 2026

Speaker identification powered by pyannote and resemblyzer

Python 44 4 Updated Mar 16, 2026

cython + htslib == fast VCF and BCF processing

Cython 436 76 Updated Feb 23, 2026

Multi-format 1D/2D barcode image processing library, usable in JavaScript ecosystem.

TypeScript 2,873 573 Updated Dec 1, 2025

A Tamagotchi-style virtual pet that lives in your terminal and reflects the health of your server.

Python 34 2 Updated Mar 13, 2026

Lineage-aware Kraken2 refinement for long-read metagenomics

Python 11 Updated Mar 26, 2026

CommonMark compliant Markdown formatter

Python 749 55 Updated Mar 16, 2026

LoFreq Star: Sensitive variant calling from sequencing data

C 111 36 Updated Oct 16, 2025
Python 24 5 Updated Mar 27, 2026

A rust-native port of wfa2lib

Rust 7 Updated Mar 9, 2026

Command line tool for detecting life science data types.

Rust 8 3 Updated Feb 9, 2026

A scientific plotting library in Rust

Rust 638 20 Updated Mar 26, 2026

An interactive TLS-capable intercepting HTTP proxy for penetration testers and software developers.

Python 42,826 4,496 Updated Mar 24, 2026

De novo genome assembly for long reads using an overlap graph

Rust 21 Updated Mar 26, 2026

Tearing through FASTA/Q sequences

Rust 33 3 Updated Mar 24, 2026

A FUSE filesystem to browse & edit FASTA files

Rust 20 2 Updated Oct 18, 2024

An ultra-fast and accurate tool for KEGG Orthology (KO) assignment, powered by deep learning.

Python 16 2 Updated Mar 2, 2026
Shell 1 Updated Feb 20, 2026

PostgreSQL utility for creating a small, sample database from a larger one

Perl 349 53 Updated Nov 23, 2025

Ultra-rapid detection of viral variants directly from sequencing data

Rust 38 Updated Feb 17, 2026

Offline documentation browser inspired by Dash

C++ 12,565 828 Updated Mar 27, 2026

A Snakemake executor plugin for submitting jobs via GA4GH TES.

Python 1 3 Updated Sep 7, 2024

Amplicon sequencing variants from 16s ONT R10.4 / HiFi long reads

Rust 23 2 Updated Jan 28, 2026

Your own personal AI assistant. Any OS. Any Platform. The lobster way. 🦞

TypeScript 338,555 66,522 Updated Mar 27, 2026
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