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  • Swedish University of Agricultural Sciences
  • Uppsala, Sweden
  • 08:17 (UTC +02:00)

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Parser of eggnog ANnotated files using KEGG entries (used in RVanDamme/MAFIN)

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The command line interface for access to the Data Delivery System primarily developed by the SciLifeLab Data Centre.

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A cloud-based system for the delivery of data from SciLifeLab Facilities to their users (e.g. research group).

Python 9 8 Updated Apr 14, 2026

Open-source, self-hosted note-taking tool built for quick capture. Markdown-native, lightweight, and fully yours.

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A highly customizable homepage (or startpage / application dashboard) with Docker and service API integrations.

JavaScript 29,527 1,873 Updated Apr 14, 2026

tools for working with genome variation graphs

C++ 1,309 215 Updated Apr 13, 2026

The world’s fastest framework for building websites.

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🙃 A delightful community-driven (with 2,400+ contributors) framework for managing your zsh configuration. Includes 300+ optional plugins (rails, git, macOS, hub, docker, homebrew, node, php, python…

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A monitor of resources

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A simplified version of Dorado built on top of S/BLOW5 format.

C++ 36 15 Updated Apr 13, 2026
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TypeScript 11,986 577 Updated Apr 13, 2026

Misassembly Identifier

Python 18 1 Updated Apr 12, 2026

Your home directory is your castle. Don't leave your dotfiles behind.

Ruby 2,466 124 Updated Apr 11, 2026

Daemon to ban hosts that cause multiple authentication errors

Python 17,488 1,470 Updated Apr 11, 2026

Unlock your displays on your Mac! Flexible HiDPI scaling, XDR/HDR extra brightness, virtual screens, DDC control, extra dimming, PIP/streaming, EDID override and lots more!

31,133 587 Updated Apr 11, 2026

An assembly workflow for analysing data in the Earth Biogenome Project pilot project.

Nextflow 18 13 Updated Apr 10, 2026

Telomere-to-telomere assembly of accurate long reads (PacBio HiFi, Oxford Nanopore Duplex, HERRO corrected Oxford Nanopore Simplex) and Oxford Nanopore ultra-long reads.

Python 387 34 Updated Apr 10, 2026

Post-verkko graph and assembly curation in Python.

Jupyter Notebook 18 Updated Apr 9, 2026

Mumemto: multi-MUM and MEM finding across pangenomes

C++ 130 4 Updated Apr 8, 2026

Simple Python version management

Shell 44,608 3,240 Updated Apr 8, 2026

An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)

C++ 2,324 370 Updated Apr 8, 2026

Genome browser and variant annotation

C++ 392 10 Updated Apr 8, 2026

Backup and keep your application settings in sync.

Python 15,190 939 Updated Apr 7, 2026

Extensive de-novo TE Annotator

Perl 439 92 Updated Apr 5, 2026

Official home of genome aligner based upon notion of Cactus graphs

Python 671 125 Updated Apr 3, 2026

Nvidia GPU exporter for prometheus using nvidia-smi binary

Go 1,453 146 Updated Apr 3, 2026

RepeatMasker is a program that screens DNA sequences for interspersed repeats and low complexity DNA sequences.

Perl 301 50 Updated Apr 2, 2026
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