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4 followers · 10 following
  • SLU | UU
  • Uppsala, Sweden
  • 12:52 (UTC +01:00)

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Lists (14)

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yarrick / iodine

Official git repo for iodine dns tunnel

C 7,509 570 Updated Sep 4, 2025

ComparativeGenomicsToolkit / cactus

Official home of genome aligner based upon notion of Cactus graphs

C 634 123 Updated Dec 16, 2025

dfguan / purge_dups

haplotypic duplication identification tool

C 272 24 Updated Oct 30, 2025

thegenemyers / FASTGA

Pairwise whole genome aligner

C 222 12 Updated Nov 30, 2025

lh3 / pangene

Constructing a pangenome gene graph

C 201 14 Updated Aug 11, 2025

lh3 / yak

Yet another k-mer analyzer

C 152 10 Updated Dec 22, 2025

marbl / meryl

A genomic k-mer counter (and sequence utility) with nice features.

C 150 15 Updated Jul 4, 2025

freeseek / score

Tools to work with GWAS-VCF summary statistics files

C 129 8 Updated Aug 20, 2025

lh3 / minipileup

Simple pileup-based variant caller

C 95 9 Updated Apr 25, 2025

at-cg / mm2-plus

Fast long-read mapper and whole-genome aligner (accelerated version of minimap2)

C 36 2 Updated Dec 3, 2025