An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)

Multi-platform, free open source software for visualization and image computing.

Open Babel is a chemical toolbox designed to speak the many languages of chemical data.

Accelerated BLAST compatible local sequence aligner.

拙著「問題解決力を鍛える!アルゴリズムとデータ構造」の補足資料。ソースコードと、章末問題への略解を掲載。

🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment

A fast and sensitive gapped read aligner

Versatile open-source tool for microbiome analysis

Ultra-fast and memory-efficient (meta-)genome assembler

A set of tools written in Perl and C++ for working with VCF files, such as those generated by the 1000 Genomes Project.

Graph-based alignment (Hierarchical Graph FM index)

Fast and accurate gene fusion detection from RNA-Seq data

a tool for CNV discovery and genotyping from depth-of-coverage by mapped reads

A tool for estimating repeat sizes

Spliced read mapper for RNA-Seq

❗ This is a read-only mirror of the CRAN R package repository. glmnet — Lasso and Elastic-Net Regularized Generalized Linear Models. Homepage: https://glmnet.stanford.edu

Maven GUI: Metabolomics Analysis and Visualization Engine