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4 stars written in C++
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bbuchfink / diamond

Accelerated BLAST compatible local sequence aligner.

C++ 1,196 184 Updated Nov 6, 2025

bnprks / BPCells

Scaling Single Cell Analysis to Millions of Cells

C++ 233 23 Updated Oct 29, 2025

statgen / popscle

A suite of population scale analysis tools for single-cell genomics data including implementation of Demuxlet / Freemuxlet methods and auxilary tools

C++ 57 18 Updated May 5, 2021

zdebruine / singlet

Single-cell analysis with non-negative matrix factorization

C++ 45 15 Updated Jul 24, 2025

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