Lists (4)
Stars
⚡ A Fast, Extensible Progress Bar for Python and CLI
Turn (almost) any Python command line program into a full GUI application with one line
Pyodide is a Python distribution for the browser and Node.js based on WebAssembly
Gel supercharges Postgres with a modern data model, graph queries, Auth & AI solutions, and much more.
An open source multi-tool for exploring and publishing data
A set of tools to keep your pinned Python dependencies fresh.
Evolutionary Scale Modeling (esm): Pretrained language models for proteins
A terminal application to view, tail, merge, and search log files (plus JSONL).
Official repository for the Boltz biomolecular interaction models
DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
napari: a fast, interactive, multi-dimensional image viewer for python
Turn repositories into Jupyter-enabled Docker images
Implementation of Alphafold 3 from Google Deepmind in Pytorch
A powerful and flexible machine learning platform for drug discovery
A Data Streaming Library for Efficient Neural Network Training
Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking
Toolbox for molecular animations in Blender, powered by Geometry Nodes.
In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more
Working with molecular structures in pandas DataFrames
Python Client and Toolkit for DataFrames, Big Data, Machine Learning and ETL in Elasticsearch
👁️ Python library to plot DNA sequence features (e.g. from Genbank files)
Incubator for useful bioinformatics code, primarily in Python and R
Rapid & standardized annotation of bacterial genomes, MAGs & plasmids
A tool to find sequencing data and metadata from public databases.
Open-source bioinformatics components for Dash
Plot structural variant signals from many BAMs and CRAMs