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@emo-bon

EMO BON

European Marine Omics Biodiversity Observation Network (EMBRC)

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  1. MetaGOflow MetaGOflow Public

    Forked from EBI-Metagenomics/pipeline-v5

    MGnify oriented implementation for the Marine Genomic Observatories oriented pipeline, developed in the framework of an EOSC-Life funded project

    Python 10 8

  2. hackathon2022 hackathon2022 Public

    Tutorials and further material for the "Learning Data Management and Workflow Analyses: a hackathon from the EMBRC’s EMO BON (marine metagenomics) project" hackathon

    Common Workflow Language

  3. governance-crate governance-crate Public

    Holds the governance content for the emo-bon data management

  4. sequencing-logistics-crate sequencing-logistics-crate Public

    The files controlling and describing the sequencing metadata

    2

  5. emobon-dm-tools emobon-dm-tools Public

    Collection of scripts and tricks that help automate collecting / formatting / checking the data from the observatories

    Python

  6. emo-bon.github.io emo-bon.github.io Public

    For the data landing page

Repositories

Showing 10 of 54 repositories
  • analysis-results-cluster-02-crate Public

    A repository to contain the results of the MetaGOflow analyses runs (cluster 2)

    emo-bon/analysis-results-cluster-02-crate’s past year of commit activity
    0 CC-BY-4.0 0 0 0 Updated Feb 18, 2026
  • metagoflow-data-products-ro-crate Public

    Code to create RO-Crates for MetaGOflow workflow outputs

    emo-bon/metagoflow-data-products-ro-crate’s past year of commit activity
    Go 0 CC-BY-4.0 0 3 0 Updated Feb 17, 2026
  • analysis-results-cluster-01-crate Public

    A repository to contain the results of the MetaGOflow analyses runs (cluster 1)

    emo-bon/analysis-results-cluster-01-crate’s past year of commit activity
    0 CC-BY-4.0 0 5 0 Updated Feb 17, 2026
  • data-quality-control-action Public

    Action to run the QC on the EMO BON logsheets and transform them

    emo-bon/data-quality-control-action’s past year of commit activity
    Python 0 0 14 0 Updated Feb 3, 2026
  • populate-action Public

    Action to populate observatory crates with .gitignore, README.md and raw logsheets

    emo-bon/populate-action’s past year of commit activity
    Python 0 0 1 0 Updated Jan 27, 2026
  • sequencing-logistics-crate Public

    The files controlling and describing the sequencing metadata

    emo-bon/sequencing-logistics-crate’s past year of commit activity
    0 Apache-2.0 2 8 0 Updated Jan 27, 2026
  • emo-bon.github.io Public

    For the data landing page

    emo-bon/emo-bon.github.io’s past year of commit activity
    0 0 8 0 Updated Jan 21, 2026
  • observatory-profile Public

    Repository for the templates and additional metadata, that are used to semantically uplift emo-bon logsheet data into triples

    emo-bon/observatory-profile’s past year of commit activity
    0 1 20 0 Updated Jan 21, 2026
  • semantic-uplifting-action Public

    github actions wrapper around pysembench

    emo-bon/semantic-uplifting-action’s past year of commit activity
    Python 0 0 1 0 Updated Jan 20, 2026
  • momics-demos Public

    Marine omics platform NBs

    emo-bon/momics-demos’s past year of commit activity
    Jupyter Notebook 0 MIT 0 7 (2 issues need help) 0 Updated Jan 14, 2026

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