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@tskit-dev @AlphaGenes @HighlanderLab

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7 stars written in C
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Implementation of the Pairwise Sequentially Markovian Coalescent (PSMC) model

C 180 59 Updated Nov 17, 2025

STITCH - Sequencing To Imputation Through Constructing Haplotypes

C 85 21 Updated Nov 4, 2025

Infer a tree sequence from genetic variation data.

C 60 16 Updated Nov 10, 2025

The fastest VCF/BCF parser in R https://doi.org/10.1093/bioinformatics/btae049

C 18 4 Updated Nov 21, 2025

R Port of psmc

C 17 4 Updated Mar 16, 2023

Software for Testing Accuracy, Reliability and Scalability of Hierarchical computations.

C 7 10 Updated Nov 21, 2023
C 1 Updated Sep 30, 2025