A grammar of graphics for comparative genomics

Tidy Geospatial Networks in R

Integrative Composable Visualization Framework for ggplot2

Visualize and annotate genomic coverage with ggplot2

inlabru

QUILT: Low coverage whole genome sequence imputation with large reference panels

Population genetic simulations in R

Tools for working with pedigrees in R

R package that constructs (non)additive genetic relationship matrices, and their inverses, from a pedigree to be used in linear mixed effect models (A.K.A. the 'animal model').

Tidying and visualization for animal pedigree

R packages for pedigree analysis

Run and Analyse SLiM Population Genetics Forward Simulations from R.

ggret: Visualisation of tree-based phylogenetic networks

Computation of pedigree-based relatedness coefficients. Part of the pedsuite ecosystem for pedigree analysis in R

R-package for computing IBD (segment) probabilities for pedigree members

Simulate Complex Traits from Genotypes

HMM Toolkit for Inferring IBD Segments from SNP Genotypes

Mutation models for pedigree likelihood computations

Almond breeding simulations with AlphaSimR

Pedigree Mermaid Syntax

Estimation of Recombination Rate and Maternal LD in Half-Sibs