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vcflib Public
Forked from vcflib/vcflibC++ library and cmdline tools for parsing and manipulating VCF files
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wfmash Public
Forked from waveygang/wfmashbase-accurate DNA sequence alignments using WFA and mashmap2
C++ MIT License UpdatedSep 26, 2026 -
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guix-tailscale Public
Forked from umanwizard/guix-tailscaleGuix channel providing tailscale, tailscaled, and tailscale-service-type
Scheme Apache License 2.0 UpdatedApr 25, 2026 -
bsg_bladerunner Public
Forked from bespoke-silicon-group/bsg_bladerunnerMeta-Repository for Bespoke Silicon Group's Manycore Architecture (A.K.A HammerBlade)
Scheme BSD 3-Clause "New" or "Revised" License UpdatedApr 19, 2026 -
cosigt Public
Forked from davidebolo1993/cosigtCOsine SImilarity-based Genotyper using pangenomes
Python GNU General Public License v3.0 UpdatedApr 8, 2026 -
WFA2-lib Public
Forked from smarco/WFA2-libWFA2-lib: Wavefront alignment algorithm library v2
C Other UpdatedMar 18, 2026 -
Calculate impact for researchers in bioinformatics
Ruby MIT License UpdatedFeb 8, 2026 -
ravanan Public
Forked from arunisaac/ravananHigh-reproducibility CWL runner powered by Guix
Scheme GNU General Public License v3.0 UpdatedDec 2, 2025 -
publication-template Public template
Forked from biohackrxiv/publication-templateMinimal example of a BioHackrXiv publication that can be generated with the preview server
TeX Creative Commons Zero v1.0 Universal UpdatedNov 27, 2025 -
bhxiv-gen-pdf Public
Forked from biohackrxiv/bhxiv-gen-pdfGenerate a PDF for BioHackrXiv.org
Ruby GNU General Public License v3.0 UpdatedNov 24, 2025 -
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agc Public
Forked from refresh-bio/agcAssembled Genomes Compressor
C++ MIT License UpdatedOct 27, 2025 -
impg Public
Forked from pangenome/impgimplicit pangenome graph
Rust MIT License UpdatedOct 10, 2025 -
ruby-propagator-network Public
Example of a simple propagator network
Ruby MIT License UpdatedJun 22, 2025 -
spoa-rs Public
Forked from AndreaGuarracino/spoa-rsRust bindings to the SIMD partial order alignment library
C++ BSD 3-Clause "New" or "Revised" License UpdatedJun 8, 2025 -
racket-bibtex Public
Bibtex mangler in Racket (uses Pandoc json)
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genenetwork2 Public
Forked from genenetwork/genenetwork2GeneNetwork (2nd generation)
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seqwish Public
Forked from pangenome/seqwishalignment to variation graph inducer
C++ MIT License UpdatedMar 21, 2025 -
pafcheck Public
Forked from ekg/pafcheckPAF (pairwise alignment format) validator based on extended CIGAR strings
Rust MIT License UpdatedMar 18, 2025 -
wgatools Public
Forked from wjwei-handsome/wgatoolsWhole Genome Alignment Tools
Rust MIT License UpdatedJan 25, 2025 -
moni-align Public
Forked from maxrossi91/moni-alignA Read Aligner with Multi-Genome References
C++ MIT License UpdatedSep 27, 2024 -
mgamma Public
Forked from aartaka/mgammaDoing Genome-Wide Assotiations in Guile.
Scheme GNU General Public License v3.0 UpdatedAug 12, 2024 -
guile-gsl Public
Forked from aartaka/guile-gslBindings for GNU Scientific Library in Guile.
Scheme GNU General Public License v3.0 UpdatedApr 16, 2024 -
guile-lmdb Public
Forked from aartaka/guile-lmdbLMDB (Lightning Memory-Mapped Database) bindings for Guile.
Scheme GNU General Public License v3.0 UpdatedApr 16, 2024 -
smoothxg Public
Forked from pangenome/smoothxglinearize and simplify variation graphs using blocked partial order alignment
C++ Other UpdatedAug 24, 2023 -
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genenetwork3 Public
Forked from genenetwork/genenetwork3GeneNetwork3 REST API for data science and machine learning
Python GNU Affero General Public License v3.0 UpdatedAug 6, 2023
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