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flockwatch-data Public
FlockWatch: 99.4M deduplicated ALPR search records released by US law enforcement under public-records law, with full FOIA provenance
1 UpdatedSep 23, 2026 -
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ryehowardstone-website Public
Personal homepage — ryehowardstone.com. Editorial Astro single page.
Astro UpdatedSep 12, 2026 -
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document-zero Public
An automated newsroom. Claims are extracted from public sources, every sentence is checked against the claims it cites, and anything unsupported is refused.
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paperstack Public
A local, open, routed alternative to hosted Document AI: per-page engine routing, handwriting-capable OCR, and an evaluation harness honest enough to defend the choice.
Python MIT License UpdatedAug 9, 2026 -
organoid-protocol-atlas Public
Evidence-grounded extraction of organoid culture protocols into a structured, quarriable knowledge base. (Experimental)
Python MIT License UpdatedAug 6, 2026 -
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qwen-local Public
One script to get Qwen3 running locally — chat UI + Claude Code integration
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mdanalysis Public
Forked from MDAnalysis/mdanalysisMDAnalysis is a Python library to analyze molecular dynamics simulations.
Python Other UpdatedJun 25, 2026 -
rhowardstone Public
Bioinformatics Data Scientist turned generalist; helping humans and computers connect with data.
UpdatedJun 24, 2026 -
Epstein-research-data Public
Structured data exports from forensic analysis of the 218GB DOJ Epstein file release — knowledge graph, entity extractions, image catalog, EFTA mapping
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pointcloud-atlas Public
Dataset-agnostic WebGL point-cloud visualizer (deck.gl) — color/filter/lasso embeddings of any corpus, driven by a config + binary buffer contract.
HTML MIT License UpdatedMay 21, 2026 -
TuringXiv Public
A scientific Turing test disguised as a preprint server
Python MIT License UpdatedApr 21, 2026 -
casestack Public
Turn any document dump into a searchable evidence database. Semantic, keyword, AI, and reverse image search routes
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AmpliconHunter2 Public
SIMD-accelerated C version of AmpliconHunter; ultra-fast in-silico PCR
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Epstein-Pipeline Public
Forked from stonesalltheway1/Epstein-PipelineOpen source document processing pipeline for the Epstein case files. Download OCR, extract entities, deduplicate and export documents from the DOJ Releases
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Claude-Code-Scientist Public
Transform Claude Code into a semi-autonomous, self-improving scientific researcher. Literature review, data acquisition, experimentation, synthesis, peer review
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AI-Job-Coach Public
Democratized access to elite "career coach" methodology via Claude Code, for relationship-focused job searching. Implements networking methodology grounded in career development research (Granovett…
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AmpliconHunter Public
A scalable tool for accurate PCR amplicon prediction from microbiome samples using degenerate primers.
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MHASS Public
Microbiome Hifi Amplicon Sequencing Simulator
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biopython Public
Forked from biopython/biopythonClone of Biopython (divergent 9/2/25): SIMD acceleration attempt(s)
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AmpliconHunter2_benchmark Public
Reproducibility scripts for the manuscript of AmpliconHunter2
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ubiome Public
Reproduces the results of "Cecal microbiome transplantation without antibiotic preconditioning standardizes murine microbiomes"