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Starred repositories
A website displaying hundreds of charts made with Python
Python package for creating and visualizing interactive network graphs.
Tutorials on phylogenetic and phylogenomic inference
QIIME 2中文文档(QIIME 2 Chinese Manual)
Tool for the Quality Control of Long-Read Defined Transcriptomes
Generate an interactive dot plot from mummer or minimap alignments
An R package for creating Q-Q and manhattan plots from GWAS results
Automated generation of tailored bioinformatics Jupyter Notebooks via a user interface.
A C++ drop-in replacement of FastQC to assess the quality of sequence read data
Plot curly brace with matplotlib
Here, we de novo assembled 110 representative Setaria accessions from a worldwide collected 1,844 variteies, and performed pan-/graph- genome studies, as well as demographic and genetic studies of …
Snakemake pipeline for plate scATAC-seq processing
OmicsSuite website for releasing new version.
Scripts to do haplotype analysis on pan genomes.
A simple script to create a customizable html file from an AnnotSV output.
Beautify the phylogenetic tree using one Excel sheet only
For QMUL's Genome Bioinformatics MSc module BIO721P & SIB's Spring school in bioinfo & population genomics
A framework to annotate SVs with previous known SVs (vcf file) and or with genomic features (gff and or bed files)
Galaxy Docker Image for the HiCExplorer