Stack trace visualizer

ExifTool meta information reader/writer

A simple terminal-based open source Spritz-alike (per-word RSVP aligned on optimal reading points)

⚡ ♒ Rapid prokaryotic genome annotation

cpanminus - get, unpack, build and install modules from CPAN

Automatically exported from code.google.com/p/cdhit

A curated list of awesome Perl frameworks and libraries. Come on Pull Requests!

Convert or render graphs (as ASCII, HTML, SVG or via Graphviz)

✂️ ⚡ Rapid haploid variant calling and core genome alignment

🔎 💊 Mass screening of contigs for antimicrobial and virulence genes

Rapid large-scale prokaryote pan genome analysis

🔬 ♌ Bacterial ribosomal RNA predictor

🆔 Scan contig files against PubMLST typing schemes

⚡♠️ Assemble bacterial isolate genomes from Illumina paired-end reads

A scalable high-throughput metabolic and biogeochemical functional trait profiler

🌳 Create a tree using Mash distances

the server metrics gathering

💾 📃 "Reads to report" for public health and clinical microbiology

Convert various sequence formats to FASTA

🐉 🪰 Assemble bacterial isolate genomes from Nanopore reads

SSH::Batch for cluster operations

Long-read metagenomic analysis

A tiny tool for checking the working domain of sci-hub

Practical, reusable scripts for bioinformatics

Phylogenetic and taxonomic analysis for genomes and metagenomes

Scripts and tutorials on how to assemble individual microbial genomes from metagenomes

Bacterial Isolate Genome Sequence Database (BIGSdb): A platform for gene-by-gene bacterial population annotation and analysis.

Genome Scripts used in fungal comparative genomics

Flexible circular visualization of genome-associated data with BioPerl and SVG.

🐙 A curated database of completed assemblies with taxonomy IDs