Lists (22)
Bioinformatics
181 repositories
Command Line Tools
Utilities to make life easier on the command line.43 repositories
Computational Biology
49 repositories
Data and Code for Publications
2 repositories
Data Visualization
64 repositories
Database Tools
4 repositories
Deep Learning
2 repositories
HLA
7 repositories
Learning Statistics
17 repositories
Mac apps
7 repositories
Matrix Factorization
6 repositories
nim-lang
3 repositories
PDF Tools
Tools for dealing with the PDF file format.1 repository
Python package development
19 repositories
R package development
35 repositories
Regression
9 repositories
Rust
13 repositories
Single-cell Genomics Analysis
61 repositories
Spatial Transcriptomics
1 repository
Tools for Academic Research
Tools designed to advance academic research.39 repositories
Web App Development
Libraries, packages, tools, and resources for building web applications.204 repositories
WebAssembly
Web apps powered by WebAssembly1 repository
Starred repositories
4
results
for source starred repositories
written in Nextflow
Clear filter
RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
A curated collection of Nextflow implementation patterns
RNA-seq analysis pipeline for detection of gene-fusions
A bioinformatics best-practice analysis pipeline for epitope prediction and annotation