R package for modeling and visualizing dose response data

AI agent skills for cancer biology and multi-omics research

Crossmapped phenotype ontologies for the oncology domain

Human gene annotations for the oncology domain

cfDNAPro specializes in standardized and robust cfDNA fragmentomic analysis

🌲 An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R https://shixiangwang.github.io/sigminer/reference/index.html

Functions and data relevant to the tutorials published on the WeChat official account MedBioInfoCloud are encapsulated in this R package.

Cancer Predisposition Sequencing Reporter (CPSR)

A comprehensive classification tool based on pure transcriptomics for precision medicine

Unraveling Socioeconomic Factors in the U.S. Cancer Incidence : A Linear Modeling Approach

一个开源脚本，简化TCGA(The Cancer Genome Atlas)数据的获取、解析与基因表达矩阵构建流程。通过R语言脚本实现从数据下载到矩阵合成的全自动化处理，帮助科研人员快速获取高质量的表达数据。

Biostatistics internship on proteomics and cancer avoidance

SPACEmapX

Collante V, Contreras-Gallardo F, Fuentes F, Fuentes J, Guerrero-Barría A, Guiñez-Sanhueza I, Inostroza C, Ojeda-Altamirano J, Navarrete J, Venegas-Carrasco C. Mortalidad por cáncer gástrico en la región del Biobío durante los años 2012 a 2022. Concepción: Universidad de Concepción; 2025.

Set of standardized functions to operate with genomic data

This repository contains the R code and data files for simulating a 1D chemokine gradient in heterogeneous tumors, aiming to replicate the observed T-cell distribution within tumors.

DataPulse: Framework for Statistical and Exploratory Data Analysis

Contains code related to my multi-omics integration project at WEHI.

scRNASeq drug discovery and biomarker project