a python package for fast random access to sequences from plain and gzipped FASTA/Q files

Nucleotide Archival Format - Compressed file format for DNA/RNA/protein sequences

Numerical Encoding for Human Genetic Variants

♥ Essential Functions for DNA Manipulation

Solvent Accessible Surface Areas of Biomolecules and their Complexes

Implements a modified version of the CUSUM algorithm for robust detection of step-like changes time-series data

FASTR, an efficient file format designed for lossless storage of sequencing data as numerical formats. Read more: https://www.biorxiv.org/content/10.64898/2026.01.22.701172v1

Finding Maximal Exact Matches (MEMs) using a Sampled LCP Array

A slimmed down fork of CodonW with python bindings

An improved compression tool for DNA sequences

Efficient compression of biological data

A small service to encode input as a DNA sequence 🐛

RIsearch: a tool for large-scale RNA–RNA, RNA-DNA, and DNA-DNA interaction prediction

Chemical Compiler to convert C like code to CAIN XML file

A PostgreSQL extension for storing and analyzing DNA sequences, with a particular focus on k-mer analysis

A Completely configurable implementation of a Risk like game with trainable artificial intelligence and simple logging capabilities.

a project to enable individuals to make use of open-source BME software

A header-only C library for hashing DNA sequences

Gibbs 3.2 formerly located at http://ccmbweb.ccv.brown.edu/gibbs/gibbs.html

RDBMS4C with DNA APIs