Efficient implementatin of ESM family.

molly, an LLM designed to understand multi-omics data.

Exports MISP events to STIX and ingest into McAfee ESM

Lightweight JavaScript ESM module loader for Django.

Design data and process for the AdaptyvBio protein design competition

Functional sequence annotation, metamorphism and multifunctionality research over proteins

The Climate Model Evaluation Workflow (CMEW) is a Cylc 8 workflow that is used to evaluate climate models for all Earth System Model (ESM) components.

GFlowNet-based therapeutic peptide design. Generates diverse, high-quality candidates (5.4x better diversity vs PPO/GRPO) to reduce correlated wet-lab failures. Published method with pre-trained models. Validated on FLIP & Propedia benchmarks.

This is the elastest service manager that is responsible for providing support service instances to test jobs. It's an implementation of the OSBA with further extensions.

Application of ESM2 in the analysis of TonB embedding space

🧬 Predict protein expression success before you start cloning. Save weeks of failed experiments.

A helper library for managing ESM configuration on AWARE Framework

Files for downscaling climate forcing to A20 regional model

An unstructured Voronoi mesh framework for large scale hydrologic and land surface models

Predict proteins crystallization conditions using LLMs and transfer learning

FAIR ESM model conversion to ONNX with extra model argument support

Quantum-informed IBD modeling using ESM protein embeddings and Qiskit QSVC/quantum kernels; CLI for ingest → train → report.

`a project with amount of tags`:strikethroguh: (TBC)

Emotional Bandwidth - Analysis code for Piejka, A., Fourcade, A., Gaebler, M., & Okruszek, Ł. (2026, preprint). Lost in Emotional Space: The Associations of Emotional Bandwidth with Depression and Loneliness.

"Repository for the 'Artificial Intelligence for Biology' course project. Implements PPI prediction using GCN and Protein Language Models."