Machine learning for NeuroImaging in Python
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Updated
Sep 1, 2026 - Python
Machine learning for NeuroImaging in Python
fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.
Pycortex is a python-based toolkit for surface visualization of fMRI data
Brain Imaging Analysis Kit
TAPAS - Translational Algorithms for Psychiatry-Advancing Science
SPM (Statistical Parametric Mapping) - Development Version
A Python Toolbox for Multimode Neural Data Representation Analysis - A Representational Analysis Toolbox for Neuroscience, including Representational Similarity Analysis (RSA), & Inter-Subject Correlation (ISC)
Graph theory analysis of brain MRI data
Official AFNI source and documentation
TE-dependent analysis of multi-echo fMRI
Core tools required for running Canlab Matlab toolboxes. The heart of this toolbox is object-oriented tools that enable interactive analysis of neuroimaging data and simple scripts using high-level commands tailored to neuroimaging analysis.
Python toolbox for analyzing imaging data
ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data
A Reproducible Workflow for Structural and Functional Connectome Ensemble Learning
Code supporting 'Geometric constraints on human brain function'
A dynamic connectome mapping module in python.
STAGIN: Spatio-Temporal Attention Graph Isomorphism Network
[NeurIPS 2024] Official code base for NeuroClips
Easy to use web database for statistical maps.
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