Code associated with pre-print titled: In-Scanner Thoughts shape Resting-state Functional Connectivity: how participants “rest” matters.
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Dec 12, 2025 - Jupyter Notebook
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functional-connectivity
Here are 77 public repositories matching this topic...
Code to compute the Event-marked Windowed Communication (EWC) from neural time series.
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Dec 2, 2025 - MATLAB
A rapid theta network mechanism for flexible information encoding (2023)
information-retrieval signal-processing statistical-analysis graph-theory bootstrapping network-analysis attention-mechanism hierarchical-models working-memory functional-connectivity timeseries-analysis correlation-analysis neuroscience-data ieeg gating-networks neuroscience-resources brain-behaviour spectral-parameterization ieeg-data high-frequency-data
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Nov 30, 2025 - MATLAB
Scripts used in the "Spatiotemporal Structure of Spontaneous Brain Activity in Autistic Children" project.
fmri qpp autism-spectrum-disorder functional-connectivity resting-state resting-state-fmri quasi-periodic-patterns
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Nov 11, 2025 - HTML
TMFC toolbox - a new SPM toolbox for whole-brain task-modulated functional connectivity (TMFC) analysis with user-friendly graphical interface.
fmri connectome brain-connectivity functional-connectivity psychophysiological-interaction spm12 beta-series spm25
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Oct 27, 2025 - MATLAB
TMFC denoise - a new SPM toolbox for task fMRI denoising with user-friendly graphical interface.
fmri ppi physiological-signals connectome brain-connectivity functional-connectivity denoising psychophysiological-interaction fmri-task-based-analysis rwls beta-series noise-regression acompcor
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Oct 27, 2025 - MATLAB
TMFC_denoise - a new SPM toolbox for task fMRI denoising with user-friendly graphical interface.
fmri ppi physiological-signals connectome brain-connectivity functional-connectivity denoising psychophysiological-interaction fmri-task-based-analysis rwls beta-series noise-regression acompcor
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Oct 27, 2025 - MATLAB
TMFC toolbox - a new SPM toolbox for whole-brain task-modulated functional connectivity (TMFC) analysis with user-friendly graphical interface.
fmri connectome brain-connectivity functional-connectivity psychophysiological-interaction spm12 beta-series spm25
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Oct 27, 2025 - MATLAB
Connectome-based Hopfiled Neural Networks (fcHNN)
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Oct 24, 2025 - Jupyter Notebook
Modulation of auditory gamma-band responses using transcranial electrical stimulation (2020)
signal-processing statistical-analysis graph-theory gamma eeg-data cluster-analysis spectral-analysis functional-connectivity eeg-analysis tacs timeseries-analysis brain-stimulation tdcs neuroscience-data cross-frequency-coupling neuroscience-resources phase-alignment auditory-processing
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Oct 14, 2025 - MATLAB
Code for the tms-nirs-connectivity study.
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Oct 3, 2025 - R
Spatial Heterogeneity and Subtypes of Functional Connectivity Development in Youth
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Sep 29, 2025 - MATLAB
This repository contains code to analyze widefield cortical imaging data. Types of analysis include estimation of convolution kernels, regression, and functional connectivity analysis. Published datasets can be found at
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Aug 8, 2025 - MATLAB
Bachelor thesis project analyzing fMRI connectivity and BOLD variability for CRCI biomarker discovery.
python cancer neuroimaging fmri nilearn bold biomarkers oncology functional-connectivity cognitive-impairment crci
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Jul 4, 2025 - Python
To investigate brain network dynamics linked with dimensionally-based symptom profiles exhibited across a transdiagnostic cohort of participants with and without psychiatric diagnoses.
fmri connectomics functional-connectivity network-dynamics brain-behaviour psychiatric-disorders symptom-analysis transdiagnostic
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Jul 4, 2025 - Python
This repository is associated with the manuscript: “Node persistence from topological data analysis reveals changes in brain functional connectivity”
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Oct 13, 2025 - Jupyter Notebook
Easy and comprehensive assessment of predictive power, with support for neuroimaging features
machine-learning scikit-learn cross-validation report easy-to-use neuroimaging pattern-recognition nilearn tractography structural-imaging anatomical-mri functional-connectivity tract-based-statistics resting-state
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Jun 26, 2025 - Python
Framework for Information Theoretical analysis of Electrophysiological data and Statistics
statistics information-theory rfx brainhack functional-connectivity ffx electrophysiological-data neurophysiological-data group-level gaussian-copula cluster-based brainweb brainhack-marseille institut-neurosciences-timone
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Apr 30, 2025 - Python
Predicting Gender from Resting-State fMRI Using Functional Connectivity and Machine Learning
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Apr 30, 2025 - Jupyter Notebook
A large-scale spiking model of the vision-related areas of macaque cortex.
neural-network simulation computational-neuroscience connectivity cerebral-cortex functional-connectivity primates full-scale multi-area predictive-connectomics theoretical-neuroanatomy
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Mar 21, 2025 - Python
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