spm12

An automated structural MRI morphometry system integrating CAT12 processing, brain tissue quantification, visualization, and automated report generation.

Public Releases of SPM12 - see https://github.com/spm/spm for the Development Version

SPM Containers (Docker & Singularity)

SPM Documentation

PNH segmentation pipelines based on nipype

SPM implementation of https://github.com/JosePMarques/MP2RAGE-related-scripts

SPM Notebooks

an SPM centric BIDS app

Docker image of CAT12 (standalone version)

A simple recipe to convert your neuroimaging data into a BIDS dataset.

TMFC toolbox - a new SPM toolbox for whole-brain task-modulated functional connectivity (TMFC) analysis with user-friendly graphical interface.

TMFC toolbox - a new SPM toolbox for whole-brain task-modulated functional connectivity (TMFC) analysis with user-friendly graphical interface.

Set of Octave and Matlab functions, demos and scripts to help manage ROIs and to play nice with BIDS datasets. Mostly volume-based and SPM centric.

SPM Patches for Octave

Tutorial covering group DCM analyses of fMRI and M/EEG

R implementation of registration fusion method for MNI152 (FSL) <-> MNI305 (FreeSurfer) <-> Colin27 (SPM) mapping of neuroimaging data.

Convert MP2RAGE with non-bijective UNI-T1 transfer curves to R1-maps

SPM analysis pipeline for fMRI data

Rapid and automated conversion of neuroimaging data to BIDS

Playground for active inference in Python