🧠 Explore the link between intrinsic autism and immune-mediated neurodevelopmental disorders to advance understanding and improve accommodations.

Transcriptomic profiling of blood and brain metastasis samples for cell-type-specific analysis and precision medicine.

Hypothesis Intrinsic Autism and Immune-Mediated Neurodevelopmental Disorders

A Python package for calculating the Dietary Inflammatory Index (DII) from nutrient intake data

Human survival post-LGM relied on adaptation, cooperation, and innovation. Neanderthal and Denisovan genes shaped immunity and metabolism, but uniform modern diets clash with these traits, fueling chronic disease. Embracing diversity can drive health and resilience.

#ioneurosciencehubfootnoteIntersection=) Exploring the intersection of vitamin B12 and cognitive decline in older adults.

Scripts for the research paper "Unveiling CNS Cell Morphology with Deep Learning: A Gateway to Anti-Inflammatory Compound Screening"

Metabolism of serum neurotransmitter precursors after COVID-19

Code and data for the manuscript "Transcriptomic clustering of critically ill COVID-19 patients"

Code for Jonsson*, Zhang*, et al, TteK (Granzyme K+ CD8 T cells), Science Translational Medicine, 2022: the core population of inflamed human tissue-associated CD8 T cells.

PatientINF embedding models - with forum extraction and model building scripts

Combined Ontology for Inflammatory Diseases

An ontology for ocular immune-mediated inflammatory diseases

This repository contains the code used for the data modeling and analysis presented in Kalb, Vo et al. Scientific Reports 11, 2021.

scRNA-seq datasets to support Jung et al, Sci Adv, 7(6): eabe5735, 2021. DOI: 10.1126/sciadv.abe5735

Analysis in the paper Mitra et.al. PNAS 2017.

Search PubMed for Gene associations with Atherosclerosis