ncbi

Here are 9 public repositories matching this topic...

drpedapati / pubmed-cli

🔬 PubMed from your terminal. Search, fetch, cite, traverse — built for humans and AI agents. Zero dependencies, structured JSON, agent-ready.

cli golang bioinformatics pubmed ncbi biomedical medical-informatics research-tools llm-tools agentic-ai

Updated Jun 21, 2026
Go

CNuge / go-fasta

Star

A tool for manipulating fasta files and obtaining new sequence data from NCBI in fasta format

golang bioinformatics ncbi ncbi-database fasta-sequences

Updated Oct 23, 2018
Go

chanzuckerberg / ncbi-tool-sync

Star

Sync component for NCBI data tool

ncbi biohub

Updated Aug 16, 2022
Go

chanzuckerberg / ncbi-tool-cliclient

Star

CLI client for NCBI data tool

ncbi biohub

Updated Aug 16, 2022
Go

chanzuckerberg / ncbi-tool-search

Star

Collection of script-style utility functions for the NT/NR search mapping research.

ncbi biohub

Updated Aug 16, 2022
Go

BrainGnosis / pubchem-cli

Star

Best-in-class PubChem CLI for compounds, substances, assays, references, and automation.

cli golang automation bioinformatics chemistry cheminformatics pubmed drug-discovery pubchem ncbi assays pharmaceutical structure-search agentic-ai substructure-search pug-view

Updated Mar 28, 2026
Go

dissipative / ribosome

Star

The Ribosome package is a Go library designed for efficient transcription and translation of DNA and RNA sequences, inspired by the real processes in living cells.

bioinformatics dna rna ncbi dna-sequences protein-sequence sequence-analysis gc-content

Updated Aug 17, 2023
Go

mirumirumo / ncbi-fetch

Star

ncbi-cli is a tool to connect to NCBI' s ftp server and get some info about genomes you specify.

bioinformatics genome ncbi

Updated May 2, 2025
Go

chanzuckerberg / ncbi-tool-server

Star

Server component for NCBI data tool

ncbi biohub

Updated Aug 16, 2022
Go

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