Rat strain ontology maintained by RGD
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Updated
Dec 12, 2025
Rat strain ontology maintained by RGD
Matlab code for post processing of split-Hopkinson/Kolsky bar experiments
Bioinformatics pipeline for comparing the gene expression profiles of two Trypanosoma cruzi strains
Viral genome alignment, mutation calling, clade assignment, quality checks and phylogenetic placement
Python 2D Digital Image Correlation (DIC) Software
⚡🧠A finite element Python implementation
Theoretical spectral response of a water well to harmonic strains
Polycrystal Diffraction Strain Analysis
Just some script for calculating CDP values (strain rate and temperature dependant) using FIB2010 and CEB
Module of the SailTrack system for measuring the forces acting on the boat maneuvers.
Detect complete horizontal gene transfer (HGT) event rapidly and accurately from complex metagenomics data.
Planetary crustal and mantle properties, and lithospheric displacements, stress and strain, calculations in spherical harmonics.
Metabolic Engineering Workbench
An RNA virus strain-level identification tool for short reads.
Pstrain profiles strains in metagenomics data. It infers strain abundance and genotype for each species. Also, it has a single species mode; where given a BAM and VCF, it can phase the variants for any species.
The scripts developed here were created for my personal PhD project for exploring the effect of strain on the superconducting critical temperature
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