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Starred repositories

67 results for source starred repositories written in Java
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《Hello 算法》:动画图解、一键运行的数据结构与算法教程。支持 Python, Java, C++, C, C#, JS, Go, Swift, Rust, Ruby, Kotlin, TS, Dart 代码。简体版和繁体版同步更新,English version in translation

Java 118,244 14,516 Updated Oct 30, 2025

🇨🇳 GitHub中文排行榜,各语言分设「软件 | 资料」榜单,精准定位中文好项目。各取所需,高效学习。

Java 103,486 13,376 Updated Oct 12, 2024

🌍 针对小白的算法训练 | 包括四部分:①.大厂面经 ②.力扣图解 ③.千本开源电子书 ④.百张技术思维导图(项目花了上百小时,希望可以点 star 支持,🌹感谢~)推荐免费ChatGPT使用网站

Java 35,861 6,460 Updated Jun 13, 2023

Browse media content with your own rules on Android TV

Java 25,196 1,359 Updated Nov 5, 2025

RStudio is an integrated development environment (IDE) for R

Java 4,897 1,142 Updated Nov 6, 2025

Zotero plugin to manage your attachments: automatically rename, move, and attach PDFs (or other files) to Zotero items, sync PDFs from your Zotero library to your (mobile) PDF reader (e.g. an iPad,…

Java 4,262 293 Updated Apr 16, 2024

hosts for android,implement by vpn mode,supports wildcard DNS records

Java 1,531 261 Updated Apr 6, 2024

A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.

Java 1,033 380 Updated Oct 6, 2025

Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations

Java 700 400 Updated Nov 5, 2025

Automatically exported from code.google.com/p/figtree

Java 441 114 Updated Jun 25, 2025

Accurate Species TRee ALgorithm

Java 266 68 Updated Apr 1, 2024

Bayesian Evolutionary Analysis by Sampling Trees

Java 259 86 Updated Sep 1, 2025

Maximum entropy modelling of species geographic distributions.

Java 248 97 Updated Jan 11, 2024

Bayesian Evolutionary Analysis Sampling Trees

Java 229 80 Updated Nov 6, 2025

Software for aligning viewing and editing dna/aminoacid sequences, intuitive, fast and lightweight. Download and website:

Java 143 26 Updated Mar 11, 2025

Global Biotic Interactions provides access to existing species interaction datasets

Java 138 17 Updated Sep 18, 2025

The core Mesquite repository

Java 106 28 Updated Nov 6, 2025

tool for interactively visualizing large directed graphs in three-dimensional hyperbolic space

Java 88 16 Updated Aug 31, 2021

Posterior summarisation in Bayesian phylogenetics

Java 66 17 Updated Sep 27, 2025

Dendroscope program for analyzing and visualizing rooted phylogenetic trees and networks

Java 46 6 Updated Apr 28, 2025
Java 42 8 Updated Apr 2, 2024

Automatically exported from code.google.com/p/prottest3

Java 38 15 Updated Jan 22, 2018

forester is a collection of open source libraries of Java and Ruby software for phylogenomics and evolutionary biology research

Java 37 17 Updated Oct 29, 2025

Taxonomy-aware DNA sequence processing toolkit

Java 31 10 Updated Nov 2, 2025

Automatically exported from code.google.com/p/densitree

Java 28 3 Updated Jul 27, 2025

VIGOR4

Java 21 13 Updated Aug 15, 2025

PhyDyn: Epidemiological modelling in BEAST

Java 21 7 Updated Dec 22, 2022

BEAST 2 package which provides support for multi-type trees: phylogenetic trees on structured populations.

Java 21 16 Updated Aug 11, 2025

A forward-time simulator for gene sequences modeling a variety of mutation and selection processes.

Java 20 11 Updated Aug 23, 2023

Spatial Phylogenetic Reconstruction of Evolutionary Dynamics

Java 20 7 Updated Jan 13, 2019
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