Numerical Analysis Implementations in Various Languages

A tool for estimating repeat sizes

Visual regression testing and graphical diffing with testthat

Implementations of several fast approximate algorithms for geometric optimal transport (OT)

B- and T-cell receptor sequence annotation, simulation, clonal family and germline inference, and affinity prediction

Python module utilizing libCZI for reading Zeiss CZI files.

Query language for filtering SAM/BAM reads

chia pet analysis software

Mathematical proofs in c++ by way of the Curry Howard isomorphism.