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Computational biology software, with interest in analyzing genome architecture and regulation by imaging and sequencing.
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written in C++
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Numerical Analysis Implementations in Various Languages
Visual regression testing and graphical diffing with testthat
Implementations of several fast approximate algorithms for geometric optimal transport (OT)
B- and T-cell receptor sequence annotation, simulation, clonal family and germline inference, and affinity prediction
Mathematical proofs in c++ by way of the Curry Howard isomorphism.