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Computational biology software, with interest in analyzing genome architecture and regulation by imaging and sequencing.
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written in Jupyter Notebook
Clear filter
A Haskell kernel for the Jupyter project.
A toolkit to learn how to model and interpret regulatory sequence data using deep learning.
Mapping out the coarse-grained connectivity structures of complex manifolds.
STREAM: Single-cell Trajectories Reconstruction, Exploration And Mapping of single-cell data
Software for comparing contact maps from HiC, CaptureC and other 3D genome data.
Align sequences and then parse features.